FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007946548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466109
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG26590.5704674228560273No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22250.47735615489080885No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT9560.20510224003398347No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC6300.13516151801402676No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6020.12915433943562557No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC5680.12185990830470984No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT5450.11692544018673745No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC4870.10448199884576354No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)