FastQCFastQC Report
Wed 31 May 2023
EGAF00007946549

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946549
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494519
Sequences flagged as poor quality0
Sequence length41
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTAC13500.2729925442702909No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCC12640.2556019081167761No Hit
CGAGATGTTTCCATCCAGAGGTCTCCGCAGCGGAAAAAATT10880.22001176901190853No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTA9650.19513911497839315No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAG9510.1923080811859605No Hit
ATACGGATAAGAACTACGGGCAGTGGCTGTAACCCTCTTAA7530.15226917469298448No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGG7030.14215833972001077No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATT6310.12759873735892857No Hit
AACCCTCTTAACCGCTGTATCGGCGAGAAGCTCTTCTGAGG6270.12678987056109067No Hit

[OK]Adapter Content

Adapter graph