FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007946564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449040
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20970.46699625868519506No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG9330.20777659005879207No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6590.14675752716907178No Hit
GAAAACGTACTGATCGAGCTGAGCGATTCCTCT6270.1396312132549439No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)