FastQCFastQC Report
Sun 21 May 2023
EGAF00007946572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449310
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG35790.7965547172330908No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22270.49564888384411654No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT7660.17048363045558745No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT6340.14110525027264026No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAGAA6240.13887961541029578No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5220.11617813981438206No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC4800.10683047339253524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)