FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007946612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429266
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61821.4401326916177848No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17270.4023146487259648No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7770.18100664855823662No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7460.17378501907907917No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6820.1588758485414638No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)