FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007946624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455610
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64251.4101973178815215No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15220.33405763701411295No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13400.2941111915892979No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT10910.2394591865850179No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG10600.23265512170496694No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT9440.20719474989574416No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8520.187002041219464No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7210.15824937995215205No Hit
ATGTCCGATCACCACTTCCCGGCCTCCCTGC7000.15364017471082722No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6550.14376330633655976No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5180.11369372928601215No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5140.11281578543052172No Hit
TCCTGCGATCGTTGCTGTCCGGGCTACCACC4960.10886503808081474No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)