FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007946632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences523424
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT44630.8526548266797089No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT40640.7764259949868558No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT39040.7458580424283182No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT37140.7095585987650547No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30300.5788806015773064No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT28260.5399064620651709No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC27640.5280613804487375No Hit
GGTCGTCAGGGCTCCGACGTCGAGCTGGAAA25650.4900424894540564No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG22770.43502017484868866No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG21280.40655376902855045No Hit
TCCCGCGTTCCGGCTAAAAAACCGCGTAAAC18700.35726294552790855No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC18410.3517225041266736No Hit
TCTCGCGTGCCGGCGAAGAAACCGCGTAAAC16660.3182888060157731No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC13990.2672785351837134No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC13640.26059179556153333No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA13030.24893776364859083No Hit
GCAGAAGCGCAGTCCACTCCGGAGCGTCCTG10470.2000290395549306No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA10280.19639909518860427No Hit
GAGAAAACGAAACAGACTCTGGCTTCTGTTT10270.1962080454851134No Hit
ATGGAGCCAGTTCAGCAGCGCCCGGTTATGT10230.19544384667114995No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC8450.16143699944977685No Hit
ATGGAACCTGTGCAGCAGCGCCCGGTAATGT7790.14882771901938008No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG7680.14672617228098062No Hit
ATGGAACCGGTCCAGCAGCGTCCGGTTATGT7640.14596197346701717No Hit
GGTGACGTTGCTAAAGCGATCAATGACGCGG7400.14137678058323652No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGG6970.13316164333312955No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6200.11845081616433331No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT5390.10297579018157363No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)