FastQCFastQC Report
Sun 21 May 2023
EGAF00007946692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences534700
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15500.2898821769216383No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8120.1518608565550776No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6730.1258649710117823No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6520.12193753506639236No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5590.10454460445109408No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)