FastQCFastQC Report
Wed 31 May 2023
EGAF00007946705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426931
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT6570.153889035933207No Hit
TTTCAGGGACGGTACGCCGACACGAGAACCGCGACCTTTAACTG5340.1250787597995929No Hit
TACACCGACACGGGAACCGCGACCTTTAACCGGGGATGGCGGAG4450.10423229983299409No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)