FastQCFastQC Report
Sun 21 May 2023
EGAF00007946722

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946722
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences485676
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25930.5338950246666502No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16140.3323203123069701No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9430.19416236338629045No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8600.1770727810309754No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8180.1684250405620208No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6740.13877564466846212No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5950.12250965664352366No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5950.12250965664352366No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC5910.12168606231314705No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5510.11345011900938075No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)