FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007946730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469792
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36150.7694894761937198No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA24150.5140572849260949No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA10930.2326561542129283No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10760.2290375315033036No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA9650.2054100538110483No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG9460.20136571078264426No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7010.14921497173217083No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5570.11856310878005587No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5510.11728594782371773No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4970.10579149921667462No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)