FastQCFastQC Report
Wed 31 May 2023
EGAF00007946736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469851
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10200.21709009877599492No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8790.18708058512166623No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8220.17494907960183123No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT7900.1681384098363098No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7170.15260156943371408No Hit
ATGTGCGAAGACACCATCACCTACGAATGTC6180.13153105984663224No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG5510.11727122002507177No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5460.11620705287420906No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5150.1096092165388602No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)