FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007946756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences412978
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8060.19516778133459892No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6660.16126767043280757No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG6040.14625476417629996No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5620.13608473090576254No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG5600.13560044360716553No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG5310.12857827777750871No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4870.11792395720837429No Hit
CAGAACCTGACCCTGCGTATCCAGGTTTCTA4310.10436391284765775No Hit
CGTGTTCGTGGCCACTATCGTGCGCCATGGG4270.10339533825046371No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4270.10339533825046371No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)