FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007946762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences364905
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG32890.9013304832764693No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT26860.7360819939436292No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA10320.2828133349775969No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9410.2578753374165879No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6960.1907345747523328No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6450.17675833436099805No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC5270.14442115071045888No Hit
CCGCTGCCGCCGGCAACGCTGACCGTTCCGC5060.1386662281963799No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC4890.1340074813992683No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4550.12468998780504514No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC4230.11592058206930571No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4180.11455036242309642No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG3950.1082473520505337No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC3700.10139625381948725No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)