FastQCFastQC Report
Sun 21 May 2023
EGAF00007946766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences412854
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT16210.3926327466852689No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11900.28823748831305984No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7140.1729424929878359No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6800.16470713617889132No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6260.15162745183527349No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6170.1494475044446705No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5150.12474143401783681No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4980.12062375561336454No Hit
CGTGTTCACATGCTGATGCCAGGCTGGTACC4790.11602164445542493No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4260.10318417648854075No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)