FastQCFastQC Report
Wed 31 May 2023
EGAF00007946772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences380265
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7290.19170841386927537No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6880.18092645917978253No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5490.14437300303735554No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5260.13832458943105466No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)