FastQCFastQC Report
Wed 31 May 2023
EGAF00007946780

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946780
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences487877
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29090.5962568434256995No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8820.18078327119335408No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5870.12031721110033881No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)