FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007946786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences459038
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64941.4146976938728384No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24900.5424387523473002No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC11580.2522666968747685No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10040.21871827604686322No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5100.11110191313137474No Hit
AACTACCCGCGTGATTCTAAAACCATTATCA4870.10609143469603824No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG4820.10500220025357378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)