FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007946794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517685
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31150.6017172604962477No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24150.4664998985869786No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG14960.28897881916609525No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC10800.20862107266001526No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG9750.1883384683736249No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9720.18775896539401374No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9440.18235027091764297No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9320.18003225899919834No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG9060.17500989984256834No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7290.1408192240455103No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6660.12864966147367607No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6150.11879811082028648No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5940.11474158996300839No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)