FastQCFastQC Report
Wed 31 May 2023
EGAF00007946806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475973
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67731.422979874908871No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11940.25085456527996336No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11900.2500141814766804No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9870.20736470346007022No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8070.16954743231233704No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7640.16051330642704523No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6950.1460166858204142No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5900.12395661098423649No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4920.103367207803804No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4810.10105615234477586No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)