FastQCFastQC Report
Sun 21 May 2023
EGAF00007946812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences513494
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT31090.6054598495795472No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30190.5879328677647645No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA18230.3550187538705418No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA17700.3446973090240587No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG15220.2964007369122132No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC14560.2835476169147059No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC11640.22668229813785556No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG9490.18481228602476368No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8560.16670107148282162No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8140.15852181330258971No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG7730.15053729936474428No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7650.1489793454256525No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7430.14469497209315005No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7410.14430548360837714No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC7350.14313701815405827No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6430.12522054785450268No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG6060.11801501088620314No Hit
GCAGAAGCGCAGTCCACTCCGGAGCGTCCTG5860.11412012603847367No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5610.10925151997881181No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5370.10457765816153645No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5270.10263021573767171No Hit

[OK]Adapter Content

Adapter graph