FastQCFastQC Report
Sun 21 May 2023
EGAF00007946898

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007946898
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences379264
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9320.24573911576105298No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8780.2315010124873439No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7500.19775143435707054No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6370.16795688491393856No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5270.1389533412082349No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5160.1360529868376645No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4670.12313322645966926No Hit
CACGCAGAACTGAAATCCCTGACCGGTGCGG3840.10124873439082012No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)