FastQCFastQC Report
Wed 1 May 2024
EGAF00007947310

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007947310
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19083284
Total Bases2.8 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA310570.16274452552296556No Hit
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT232170.12166144988462153No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)