FastQCFastQC Report
Sat 18 Mar 2023
EGAF00007947826

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007947826
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98793895
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGCAGAAGACGGCATACGAGATCGGAAGAGCACACGTCTGAACTCCAG2793370.28274722845981526Illumina Multiplexing PCR Primer 2.01 (100% over 30bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1453660.14714067098984204No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)