FastQCFastQC Report
Mon 13 May 2024
EGAF00007947832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007947832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70665886
Total Bases10.6 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGCAGAAGACGGCATACGAGATCGGAAGAGCACACGTCTGAACTCCAG9095411.287100539572942Illumina Multiplexing PCR Primer 2.01 (100% over 30bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1375900.19470498112766887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)