FastQCFastQC Report
Fri 10 May 2024
EGAF00007948075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11782817
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA416660.35361662665218346No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG308770.26205108676473543No Hit
CGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGG133790.11354670109872708No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)