FastQCFastQC Report
Mon 13 May 2024
EGAF00007948367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53642784
Total Bases8 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG3126860.5829041236935055No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA2307670.4301920646027618No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)