FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007948503

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948503
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478117
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64371.3463231803094222No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10160.21250028758651127No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9750.2039249807055595No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7220.15100906263529637No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7060.14766260141346155No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6550.13699575626886307No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5170.10813252823053772No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)