FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007948507

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948507
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences558096
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45860.8217224276826927No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16270.29152690576531637No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9810.17577621054442247No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6990.1252472692870044No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6040.10822510822510822No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)