FastQCFastQC Report
Wed 31 May 2023
EGAF00007948541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences538849
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT44950.8341854582638178No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9250.17166219107764885No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC8840.164053380446099No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8510.15792921579143693No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6920.12842187700079244No Hit
GAAAGCGTCGAACGTGCTATGGGTCGTGTTG5850.10856473705991845No Hit
ATGCAGACCGCGACCCCGACCAACTTCAACG5740.10652334884169777No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)