FastQCFastQC Report
Wed 31 May 2023
EGAF00007948569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences524744
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43100.8213528882655162No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12670.24145106947387676No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11090.21134114920799474No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG8860.1688442364276676No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7960.15169301602305124No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7740.1475004954797006No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG6930.13206439711554585No Hit
GACATGGCAGCTCCGCCAACCCTGCCGCAGC6530.12444163249127192No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG6190.11796228256063909No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)