FastQCFastQC Report
Sun 21 May 2023
EGAF00007948587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences381584
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG62651.6418403287349572No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT10430.27333431171118283No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9710.2544655960417628No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9510.2492242861335905No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9460.24791395865654745No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8860.2321900289320307No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8740.22904524298712733No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7570.1983835800243197No Hit
CCGGATTTTGAACAGAACATTGCGACCACCA7280.19078368065746992No Hit
GTGAACGCAAAAATTGATCGCCTGAACCAGA6380.16719778607069477No Hit
ACTAGCCCGGAAGAACCGATCTACACCCAGG6370.1669357205752862No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6300.1651012621074259No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6130.16064614868547947No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC4900.1284120927502201No Hit
GAACCGATCTACGCTACCATCGACGACCTGG4880.1278879617594029No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA4730.12395697932827372No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG4050.10613652564048807No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG3980.10430206717262779No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA3940.10325380519099334No Hit
GGCGAAGCTGAACGTGGCAAAGCCGGTGATC3900.10220554320935887No Hit
GATGGCGAACACCGTCGTCACCGTGCCCACC3850.10089521573231582No Hit

[OK]Adapter Content

Adapter graph