FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007948661

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948661
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences520516
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16430.31564831820731737No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG12840.24667829615227965No Hit
CGTGACACCACTCACATTTCCCAGAGCGCAC11600.22285578157059532No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11010.21152087543898748No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10040.19288552129041184No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9470.18193484926496015No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC7990.15350152540940143No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC7930.15234882309093284No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7570.14543260918012127No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG7450.14312720454318406No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7080.1360188735792944No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC6980.1340977030485134No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG5970.11469388068762537No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5680.10912248614836047No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5340.10259050634370509No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTC5240.1006693358129241No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)