FastQCFastQC Report
Sun 21 May 2023
EGAF00007948667

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948667
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences509600
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA25150.4935243328100471No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG25030.4911695447409733No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG20320.3987441130298274No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG18320.3594976452119309No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT16380.3214285714285714No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC15030.2949372056514914No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11760.23076923076923078No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA11610.22782574568288855No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10030.1968210361067504No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA9700.19034536891679749No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG8750.1717032967032967No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8550.16777864992150707No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7900.15502354788069073No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7850.15404238618524332No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG7330.14383830455259025No Hit
TCTGGCTACGAAATTGACCACATCGACCTGG7290.14305337519623235No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6330.12421507064364207No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5920.11616954474097331No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC5710.11204866562009419No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5130.10066718995290425No Hit

[OK]Adapter Content

Adapter graph