FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007948691

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948691
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences531678
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22390.42111954980270017No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11320.21291082196366976No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7910.14877425810358902No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7170.13485605949465654No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6130.11529534793615684No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)