FastQCFastQC Report
Wed 31 May 2023
EGAF00007948705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497642
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15260.3066461432113849No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13860.278513469522267No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13680.2748964114765233No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7070.14207000213004528No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5630.11313353776409547No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)