FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007948725

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948725
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426674
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG37270.8735006117082363No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8080.18937174517312985No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6300.14765371220182155No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5700.13359145389688615No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4630.10851375991975137No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4590.10757627603275569No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)