FastQCFastQC Report
Sun 21 May 2023
EGAF00007948744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences468663
Sequences flagged as poor quality0
Sequence length41
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTTCGTGCAGGATAGAGGCCTTAGCGGACGGAATGGTAC6820.1455203419087916No Hit
GTCGGTGCAGTTCAGACAAGTTGGGCACAGTTTACCACGAG6750.14402673136134067No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGAT6750.14402673136134067No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT6210.13250459285243343No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGG6130.13079760936963233No Hit
CATGCATTTTGGGCGGCCCAGGGCAACGTCCAGATCAGTGC5530.11799523324862426No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGG5400.11522138508907254No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)