FastQCFastQC Report
Wed 31 May 2023
EGAF00007948755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448359
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG15230.33968315568551094No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7260.1619238155139074No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAATCC5610.12512294835165572No Hit
CGTCGCCAGCGTGCAATCGACAAACGCCAGCGT5480.1222234860903874No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAATCT5440.12133134385615099No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5320.11865491715344179No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)