FastQCFastQC Report
Wed 31 May 2023
EGAF00007948763

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948763
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476197
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT14760.3099557536061756No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG10990.2307868382203164No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC7350.15434788543396957No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC7230.1518279199574966No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA7110.1493079544810236No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT6750.1417480580516047No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC6310.13250818463787045No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5880.12347830834717563No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5360.1125584579491261No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCGGT4860.10205860179715537No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)