FastQCFastQC Report
Wed 31 May 2023
EGAF00007948767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences444002
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20980.4725203940522791No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG9210.20743149805631506No Hit
GAAAACGTACTGATCGAGCTGAGCGATTCCTCT6660.1499993243273679No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6460.1454948401133328No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)