FastQCFastQC Report
Wed 31 May 2023
EGAF00007948769

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948769
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences473771
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG37570.7929991493780751No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22940.4842001726572542No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC11480.2423111587665771No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG10900.23006895736547825No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC10500.22162605984747905No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT10360.21867104571617935No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAGAA9460.19967452630068114No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT9040.19080948390678198No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7390.15598253164503526No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGGCC7330.15471609701733538No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTGAC6010.126854535207938No Hit
CAGGGCCGTTATACTACCAACGACGGTTACGTT5920.12495488326638819No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAACTG5910.12474381082843822No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA5620.11862271012788878No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT5520.11651198574838899No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC5250.11081302992373952No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGGCT5210.10996874017193961No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGGAA4980.10511407409909007No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCGCG4960.10469192922319011No Hit
CTGTCCTCCATGGCTATCACCTTCAAACGCGCG4850.10237013240574032No Hit

[OK]Adapter Content

Adapter graph