FastQCFastQC Report
Sun 21 May 2023
EGAF00007948811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462336
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG62951.3615638842746403No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22650.4899034468438538No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10780.23316375968992245No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7530.16286856312292358No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6820.14751176633444077No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6260.13539936323366555No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5930.12826169712070876No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5860.12674764673311184No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)