FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007948813

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948813
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456532
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG26590.5824345281382247No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12860.28168890680171377No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8120.17786266899143982No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6340.1388730691386365No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4960.10864517711792383No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)