FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007948843

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948843
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466913
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG69701.492783452163465No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT34520.7393240282450906No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10350.2216687048764973No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC9440.20217899266030287No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9390.20110812935172076No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8070.172837338005153No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7180.15377597111239139No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6370.13642798551336116No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5200.11136978409253973No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4810.10301705028559925No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT4750.10173201431530071No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT4720.10108949633015143No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)