FastQCFastQC Report
Wed 31 May 2023
EGAF00007948849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences452724
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10070.22243132681280425No Hit
CGTTCCTACGACGCCGATGACCGCCTGACCG6040.13341461906150326No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5240.11574380858978096No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4580.10116538995061009No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)