FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007948867

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948867
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454124
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48751.0734953448837763No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14760.325021359804811No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6990.1539227171433353No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6300.13872862918498033No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6040.1330033206789335No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5870.12925984973267213No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA4700.10349596145546151No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)