FastQCFastQC Report
Wed 31 May 2023
EGAF00007948883

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948883
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences413301
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21260.5143950776794636No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20290.4909254998173245No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8200.19840261697890885No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5950.14396287451518386No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)