FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007948895

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948895
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511346
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41730.8160814790767894No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12460.24367062615137303No Hit
ATGTGCGAAGACACCATCACCTACGAATGTC10520.2057315398966649No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8630.1687702651433667No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7050.1378714216988106No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5120.10012789774438444No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)