FastQCFastQC Report
Wed 31 May 2023
EGAF00007948900

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948900
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences522295
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT14740.2822159890483347No Hit
ATACAGGCCGGTCTGCGGGCAAACGCTCACACCTTTGACACCGG11690.22381987191146765No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT8530.1633176653040906No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA8310.15910548636307068No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA7200.13785312897883378No Hit
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT5550.10626178692118439No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)